Deep Learning Algorithms Applied to Genomics (Module for UPGEN 778)
Primary Instructor
This class will focus on recent advances in deep learning and how they have been applied to open questions in genomics,
with a particular focus on understanding gene regulation. This course will include the discussion of seminal papers,
the theory behind deep learning approaches, and software to implement these models.
2026 Spring
Human Genetics (MGM/UPGEN 732)
Guest Lecture
I will summarize what we know about human evolution, the methods that underlie these discoveries, and current work in the field.
2025 Fall
Ethical Issues in Genomics: Past, Present, and Future (Module for UPGEN 778)
Primary Instructor
In this course we will cover ethical issues related to human genetics that have come up in the past, that are currently being debated,
and that are likely to arise in the future. We will use a case study format where there will be reading assigned before each class that
advocate for two different points of view on a topic. We will then discuss the readings and the topic in class.
Genome Tools and Technologies (CBB 520)
Guest Lecture
I will be reviewing computational and experimental methods that have repeatedly
been useful to me in my own research.
Papers and Grant Writing Workshop (MGM 702)
Two times as a Guest Instructor leading a mock study section
We will have a mock study section to critique grant proposals, as well as revised versions of the grant proposals.
2025 Spring
Human Genetics (MGM/UPGEN 732)
Guest Lecture
I will summarize what we know about human evolution, the methods that underlie these discoveries, and current work in the field.
Introduction to Medical Genetics (CRP 243-01)
Guest Lecture
I will give a tour of large datasets that are useful when understanding if a genetic variant is likely to be pathogenic.
2024 Fall
Ethical Issues in Genomics: Past, Present, and Future (Module for UPGEN 778)Commendation for Excellence in Teaching
Primary Instructor
In this course we will cover ethical issues related to human genetics that have come up in the past, that are currently being debated,
and that are likely to arise in the future. We will use a case study format where there will be reading assigned before each class that
advocate for two different points of view on a topic. We will then discuss the readings and the topic in class.
Foundations of Molecular Genetics and Microbiology (MGM 701)
Guest Lecture
I will be giving a behind-the-scenes look into the initial sequencing and assembly of the human genome.
Papers and Grant Writing Workshop (MGM 702)
Two times as a Guest Instructor leading a mock study section
We will have a mock study section to critique grant proposals, as well as revised versions of the grant proposals.
2024 Spring
Foundations of Molecular Genetics and Microbiology (MGM 701)
Guest Lecture
I will be giving a behind-the-scenes look into the initial sequencing and assembly of the human genome.
Human Genetics (MGM/UPGEN 732)
Guest Lecture
I will summarize what we know about human evolution, the methods that underlie these discoveries, and current work in the field.
2023 Fall
Genetics and Genomics of Ancient, Ancestral, and Extinct Species (UPGEN 778)Commendation for Excellence in Teaching
Primary Instructor
Studying the molecular changes that underlie ancestral traits has long been in
the realm of science fiction. However, recent advances, both technological and
theoretical, have allowed us to begin rigorously dissecting the molecular basis
of ancient phenotypic changes. We will cover these recent advances as well as
discuss future research in this area.
Papers and Grant Writing Workshop (MGM 702)
Two times as a Guest Instructor leading a mock study section
We will have a mock study section to critique grant proposals, as well as revised versions of the grant proposals.
2023 Spring
Foundations of Molecular Genetics and Microbiology (MGM 701)
Guest Lecture
I will be giving a behind-the-scenes look into the initial sequencing and assembly of the human genome.
Human Genetics (MGM/UPGEN 732)
Guest Lecture
I will summarize what we know about human evolution, the methods that underlie these discoveries, and current work in the field.
Introduction to Medical Genetics (CRP 243-01)
Guest Lecture
I will give a tour of large datasets that are useful when understanding if a genetic variant is likely to be pathogenic.
2022 Fall
Misuses of Human Genetic and Phenotypic Data (Module for UPGEN 778)
Primary Instructor
In this course we will cover ethical issues related to human genetics that have come up in the past, that are currently being debated,
and that are likely to arise in the future. We will use a case study format where there will be reading assigned before each class that
advocate for two different points of view on a topic. We will then discuss the readings and the topic in class.
Papers and Grant Writing Workshop (MGM 702)
Two times as a Guest Instructor leading a mock study section
We will have a mock study section to critique grant proposals, as well as revised versions of the grant proposals.
2022 Spring
Foundations of Molecular Genetics and Microbiology (MGM 701)
Guest Lecture
I will be giving a behind-the-scenes tour to the initial sequencing and assembly of the human genome.
2021 Fall
Writing Genomics Software for Fun and Productivity (Module for UPGEN 778)
Primary Instructor
We will cover general software engineering topics, as well as topics more specific to writing applications for genomics.
This class will use the Go programming language.
Classic Papers in Development (DSCB 700)
Guest Lecture
We will read and discuss the classic papers associated with regulation of even-skipped stripe 2 in the Drosophila embryo.
Misuses of Human Genetic and Phenotypic Data (Module for UPGEN 778)
Primary Instructor
In this course will cover ethical issues related to human genetics that have come up in the past, that are currently being debated,
and that are likely to arise in the future. We will use a case study format where there will be reading assigned before each class that
advocate for two different points of view on a topic. We will then discuss the readings and the topic in class.
Papers and Grant Writing Workshop (MGM 702)
Two times as a Guest Instructor leading a mock study section
We will have a mock study section to critique grant proposals, as well as revised versions of the grant proposals.
2021 Spring
Foundations of Molecular Genetics and Microbiology (MGM 701)
Guest Lecture
I will be giving a behind-the-scenes tour to the initial sequencing and assembly of the human genome.
2020 Fall
Advanced Topics in Genetics and Genomics (UPGEN 701)
Primary Instructor
We will cover advanced topics in genetics and genomics, as well as the art and skill of
presenting your own research in a seminar.
Classic Papers in Development (DSCB 700)
Guest Lecture
We will read and discuss the classic papers associated with regulation of even-skipped stripe 2 in the Drosophila embryo.
Genetics and Genomics of Ancient, Ancestral, and Extinct Species (UPGEN 778)
Primary Instructor
Studying the molecular changes that underlie ancestral traits has long been in
the realm of science fiction. However, recent advances, both technological and
theoretical, have allowed us to begin rigorously dissecting the molecular basis
of ancient phenotypic changes. We will cover these recent advances as well as
discuss future research in this area.
Foundations in Professionalism (BIOTRAIN 701)
Co-Teaching with Dr. Stefano DiTalia
Everything you need to know about being a graduate student.
2020 Spring
Advanced Topics in Genetics and Genomics (UPGEN 701)
Primary Instructor
We will cover advanced topics in genetics and genomics, as well as the art and skill of
presenting your own research in a seminar.
2019 Fall
Classic Papers in Development (DSCB 700)
Guest Lecture
We will read and discuss the classic papers associated with regulation of even-skipped stripe 2 in the Drosophila embryo.
Genetics and Genomics of Ancient, Ancestral, and Extinct Species (UPGEN 778)
Primary Instructor
Studying the molecular changes that underlie ancestral traits has long been in
the realm of science fiction. However, recent advances, both technological and
theoretical, have allowed us to begin rigorously dissecting the molecular basis
of ancient phenotypic changes. We will cover these recent advances as well as
discuss future research in this area.
2019 Spring
Advanced Topics in Genetics and Genomics (UPGEN 701)
Primary Instructor
I will cover advanced topics in genetics and genomics, as well as the art and skill of
presenting your own research as a seminar.
Cell and Molecular Biology Colloquium (CMB 764)
Guest Lecture
I will present a summary of my career path and take questions from the audience.
2018 Fall
Foundations of Molecular Genetics and Microbiology (MGM 701)
Guest Lecture
I will be presenting the paper "Evolution at Two Levels in Humans
and Chimpanzees" and leading a discussion.
Genome Tools and Technologies (CBB 520)
Guest Lecture
I will be reviewing computational and experimental methods that have repeatedly
been useful to me in my own research.